Source: unifrac
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Nilesh Patra <nilesh@debian.org>
Section: science
Testsuite: autopkgtest-pkg-python
Priority: optional
Build-Depends: debhelper-compat (= 13),
               dh-exec,
               dh-python,
               python3-all-dev,
               python3-setuptools,
               python3-numpy,
               cython3,
               libhdf5-dev,
               hdf5-helpers,
               python3-h5py,
               python3-biom-format,
               python3-skbio <!nocheck>,
               chrpath
Standards-Version: 4.5.1
Vcs-Browser: https://salsa.debian.org/med-team/unifrac
Vcs-Git: https://salsa.debian.org/med-team/unifrac.git
Homepage: https://github.com/biocore/unifrac
Rules-Requires-Root: no

Package: python3-unifrac
Architecture: any
Section: python
Depends: ${shlibs:Depends},
         ${misc:Depends},
         ${python3:Depends}
Description: high-performance phylogenetic diversity calculations
 The de facto repository for high-performance phylogenetic diversity
 calculations. The methods in this repository are based on an
 implementation of the Strided State UniFrac algorithm which is faster,
 and uses less memory than Fast UniFrac. Strided State UniFrac supports
 Unweighted UniFrac, Weighted UniFrac, Generalized UniFrac, Variance
 Adjusted UniFrac and meta UniFrac. This repository also includes Stacked
 Faith (manuscript in preparation), a method for calculating Faith's PD
 that is faster and uses less memory than the Fast UniFrac-based
 reference implementation.
 .
 This package contains the Python3 module.

Package: libssu0
Section: libs
Architecture: any
Depends: ${shlibs:Depends},
         ${misc:Depends}
Description: high-performance phylogenetic diversity calculations (lib)
 The de facto repository for high-performance phylogenetic diversity
 calculations. The methods in this repository are based on an
 implementation of the Strided State UniFrac algorithm which is faster,
 and uses less memory than Fast UniFrac. Strided State UniFrac supports
 Unweighted UniFrac, Weighted UniFrac, Generalized UniFrac, Variance
 Adjusted UniFrac and meta UniFrac. This repository also includes Stacked
 Faith (manuscript in preparation), a method for calculating Faith's PD
 that is faster and uses less memory than the Fast UniFrac-based
 reference implementation.
 .
 This package contains the shared library.

Package: libssu-dev
Architecture: any
Section: libdevel
Depends: libssu0 (= ${binary:Version}),
         ${shlibs:Depends},
         ${misc:Depends}
Description: high-performance phylogenetic diversity calculations (dev)
 The de facto repository for high-performance phylogenetic diversity
 calculations. The methods in this repository are based on an
 implementation of the Strided State UniFrac algorithm which is faster,
 and uses less memory than Fast UniFrac. Strided State UniFrac supports
 Unweighted UniFrac, Weighted UniFrac, Generalized UniFrac, Variance
 Adjusted UniFrac and meta UniFrac. This repository also includes Stacked
 Faith (manuscript in preparation), a method for calculating Faith's PD
 that is faster and uses less memory than the Fast UniFrac-based
 reference implementation.
 .
 This package contains the static library and header files.

Package: libssu-tools
Architecture: any
Depends: ${shlibs:Depends},
         ${misc:Depends},
         libssu0
Description: high-performance phylogenetic diversity calculations (binaries)
 The de facto repository for high-performance phylogenetic diversity
 calculations. The methods in this repository are based on an
 implementation of the Strided State UniFrac algorithm which is faster,
 and uses less memory than Fast UniFrac. Strided State UniFrac supports
 Unweighted UniFrac, Weighted UniFrac, Generalized UniFrac, Variance
 Adjusted UniFrac and meta UniFrac. This repository also includes Stacked
 Faith (manuscript in preparation), a method for calculating Faith's PD
 that is faster and uses less memory than the Fast UniFrac-based
 reference implementation.
 .
 This package contains target binaries ssu and faithpd
