Author: Michael R. Crusoe <michael.crusoe@gmail.com>
Description: Skip cleaning parafly, we don't build it here
--- trinityrnaseq.orig/trinity-plugins/Makefile
+++ trinityrnaseq/trinity-plugins/Makefile
@@ -41,7 +41,6 @@
 clean:
 	rm -rf ./seqtk-trinity-0.0.2
 	cd scaffold_iworm_contigs && $(MAKE) clean
-	cd parafly-code && $(MAKE) clean
 	rm -f ./parafly # rm symlink
 	rm -f ./Trimmomatic # rm symlink
 	cd slclust && $(MAKE) clean
