Source: sra-sdk
Section: science
Priority: optional
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Charles Plessy <plessy@debian.org>, Andreas Tille <tille@debian.org>
DM-Upload-Allowed: yes
Build-Depends: debhelper (>= 8),
 libbz2-dev,
 zlib1g-dev,
 libxml2-dev
Standards-Version: 3.9.2
Homepage: http://trace.ncbi.nlm.nih.gov/Traces/sra/sra.cgi?cmd=show&f=software&m=software&s=software
Vcs-Git: git://git.debian.org/debian-med/sra-sdk.git
Vcs-Browser: http://git.debian.org/?p=debian-med/sra-sdk.git;a=summary

Package: sra-toolkit
Architecture: any
Depends: ${shlibs:Depends}, ${misc:Depends}
Description: utilities for the NCBI Sequence Read Archive
 Tools for reading the SRA archive, generally by converting individual runs
 into some commonly used format such as fastq.
 .
 The textual dumpers "sra-dump" and "vdb-dump" are provided in this
 release as an aid in visual inspection. It is likely that their
 actual output formatting will be changed in the near future to a
 stricter, more formalized representation[s]. PLEASE DO NOT RELY UPON
 THE OUTPUT FORMAT SEEN IN THIS RELEASE.
 .
 The "help" information will be improved in near future releases, and
 the tool options will become standardized across the set. More documentation
 will also be provided documentation on the NCBI web site.
 .
 Tool options may change in the next release. Version 1 tool options
 will remain supported wherever possible in order to preserve
 operation of any existing scripts.

Package: sra-toolkit-libs0
Architecture: any
Depends: ${shlibs:Depends}, ${misc:Depends}
Description: Libraries for the SRA Toolkit
 This package provides all libraries and modules for executing the
 NCBI SRA toolkit's programs.  This currently includes:
 .
  libkdb                # physical layer reading library
  libkfg                # configuration library
  libkfs                # file system library
  libklib               # support library
  libkproc              # process synchronization library
  libkq                 # cross-thread queue library
  libksproc             # single-threaded emulation library
  libksrch              # search algorithm library
  libkxfs               # XML to filesystem library
  libkxml               # XML container support library
  libsra-schema         # weak-linked sra schema
  libsradb              # API for accessing sra
  libsrapath            # weak-link stubs for srapath
  libsrareader          # reader library
  libvdb                # virtual layer reading library
  libwkdb               # physical layer update library
  libwsradb             # update API for SRA
  libwvdb               # virtual layer update library

Package: sra-toolkit-libs-dev
Architecture: any
Depends: ${shlibs:Depends}, ${misc:Depends}
Description: Development files for the NCBI SRA Toolkit's libraries
 This package provides development support files for the
 NCBI SRA Toolkit's libraries.
