#!/bin/sh -e

MAFFT="mafft --thread 0"
TESTDATADIR=/usr/share/doc/mafft/test/

PF=$ADTTMP/progress

$MAFFT --progress $PF                               $TESTDATADIR/sample | diff $TESTDATADIR/sample.fftns2 - || cat $PF >&2
$MAFFT --progress $PF --maxiterate 100              $TESTDATADIR/sample | diff $TESTDATADIR/sample.fftnsi - || cat $PF >&2
$MAFFT --progress $PF --globalpair                  $TESTDATADIR/sample | diff $TESTDATADIR/sample.gins1 - || cat $PF >&2
$MAFFT --progress $PF --globalpair --maxiterate 100 $TESTDATADIR/sample | diff $TESTDATADIR/sample.ginsi - || cat $PF >&2
$MAFFT --progress $PF --localpair                   $TESTDATADIR/sample | diff $TESTDATADIR/sample.lins1 - || cat $PF >&2
$MAFFT --progress $PF --localpair --maxiterate 100  $TESTDATADIR/sample | diff $TESTDATADIR/sample.linsi - || cat $PF >&2
