Source: cyvcf2
Section: science
Priority: optional
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Steffen Moeller <moeller@debian.org>
Build-Depends: debhelper (>= 10),
 dh-python, 
 zlib1g-dev,
 cython, cython3,
 python-all, python-setuptools, python3-all, python3-setuptools,
 libpython-dev, libpython3-dev,
 python-numpy, python3-numpy,
 python-coloredlogs, python3-coloredlogs,
 python-click, python3-click
Standards-Version: 4.1.5
Homepage: https://github.com/brentp/cyvcf2
X-Python-Version: >= 2.6
X-Python3-Version: >= 3.2
Vcs-Git: https://salsa.debian.org/med-team/cyvcf2
Vcs-Browser: https://salsa.debian.org/med-team/cyvcf2
Testsuite: autopkgtest-pkg-python

Package: python-cyvcf2
Architecture: any
Depends: ${python:Depends}, ${misc:Depends}, ${shlibs:Depends}
Suggests: python-cyvcf2-doc
Description: VCF parser based on htslib (Python 2)
 This modules allows fast parsing of VCF and BCF including region-queries
 with Python. This is essential for efficient analyses of nucleotide
 variation with Python on high-throughput sequencing data.
 .
 cyvcf2 is a cython wrapper around htslib.  Attributes like
 variant.gt_ref_depths return a numpy array directly so they are
 immediately ready for downstream use.
 .
 This package installs the library for Python 2.

Package: python3-cyvcf2
Architecture: any
Depends: ${python3:Depends}, ${misc:Depends}, ${shlibs:Depends}
Suggests: python-cyvcf2-doc
Description: VCF parser based on htslib (Python 3)
 This modules allows fast parsing of VCF and BCF including region-queries
 with Python. This is essential for efficient analyses of nucleotide
 variation with Python on high-throughput sequencing data.
 .
 cyvcf2 is a cython wrapper around htslib.  Attributes like
 variant.gt_ref_depths return a numpy array directly so they are
 immediately ready for downstream use.
 .
 This package installs the library for Python 3.
